Tindallia californiensis strain APO

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Tindalliaceae

Genus

Tindallia

Description

Tindallia californiensis strain APO is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. This characteristic is significant as it indicates the strain's adaptation to specific ecological niches where oxygen is limited or absent, such as deep-sea sediments or certain types of wetlands. The strain has a single replicon, which suggests a streamlined genetic organization, potentially enhancing its efficiency in nutrient utilization and metabolic processes in its anaerobic habitat. The genomic data for Tindallia californiensis strain APO is cataloged under the accession number FNPV00000000.1, providing a reference point for researchers interested in studying this organism further. Understanding its genetic makeup may yield insights into its metabolic pathways and ecological role. The anaerobic nature of Tindallia californiensis strain APO may also have implications for biogeochemical cycles in its environment. Anaerobic bacteria are often involved in processes such as fermentation, denitrification, and methanogenesis, contributing to nutrient cycling and energy flow within ecosystems. The presence of Tindallia californiensis strain APO in an anaerobic ecosystem could therefore play a crucial role in maintaining ecological balance and supporting the diversity of microbial life in its habitat. Overall, the characteristics of this strain highlight its specialized adaptations and potential ecological significance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyTindalliaceae
GenusTindallia
SpeciesTindallia californiensis
Strainstrain APO

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tindallia californiensis strain APO genome assembly, contig:

Gene Summary

Adenine Count

903415 bp

Thymine Count

970530 bp

Guanine Count

576919 bp

Cytosine Count

662820 bp

Genome Length

3122071 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-methylthioadenosine/s-adenosylhomocysteine deaminaseSAMN05192546_10144Not AvailableNegative39654 - 4095248604.7
pyrimidine-specific ribonucleoside hydrolaseSAMN05192546_10145Not AvailableNegative40942 - 4187433911.0
pyrimidine-specific ribonucleoside hydrolaseSAMN05192546_10146Not AvailableNegative41912 - 4284133460.6
simple sugar transport system permease proteinSAMN05192546_10147Not AvailableNegative42838 - 4377332874.1
simple sugar transport system permease proteinSAMN05192546_10148Not AvailableNegative43766 - 4484539168.1
simple sugar transport system atp-binding proteinSAMN05192546_10149Not AvailableNegative44838 - 4641258012.8
nucleoside-binding proteinSAMN05192546_10150Not AvailableNegative46536 - 4770242575.5
rnase rSAMN05192546_10151Not AvailableNegative47796 - 4992581785.4
uncharacterized membrane protein ysda, duf1294 familySAMN05192546_10152Not AvailableNegative50041 - 5031310326.6
k(+)-stimulated pyrophosphate-energized sodium pumpSAMN05192546_10153Not AvailableNegative50408 - 5241767827.8

Displaying genes 131 – 140 of 2891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.