Halopenitus persicus strain DC30

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halopenitus

Description

Halopenitus persicus strain DC30 is characterized by a single replicon, which may indicate a streamlined genomic organization. This strain is cataloged under the accession number FNPC00000000.1, providing a reference for genetic and genomic studies. The presence of one replicon suggests that Halopenitus persicus may possess a simplified genetic architecture compared to other organisms with multiple replicons. This can have implications for its adaptability and evolutionary strategies, potentially allowing for more efficient replication and maintenance of genetic integrity in its environment. Furthermore, the strain's specific ecological role is not detailed in the available data; however, strains with similar genomic configurations often occupy specialized niches, which may influence their interactions within microbial communities. Understanding the genomic traits of Halopenitus persicus strain DC30 can contribute to insights into its ecological functions and relationships with other microorganisms. Overall, the single-replicon structure of Halopenitus persicus strain DC30 may reflect adaptations that enable survival in specific environmental conditions, highlighting the importance of genomic studies in elucidating the ecological roles of microbial strains.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalopenitus
SpeciesHalopenitus persicus
Strainstrain DC30

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046 genome

Gene Summary

Adenine Count

588401 bp

Thymine Count

593479 bp

Guanine Count

1120980 bp

Cytosine Count

1121516 bp

Genome Length

3424491 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05216564_101517Not AvailablePositive493994 - 49440715257.6
hydroxymethylglutaryl-coa synthaseSAMN05216564_101518Not AvailableNegative494450 - 49579349753.5
hypothetical proteinSAMN05216564_101519Not AvailableNegative495902 - 49658823636.6
neurotransmitter:na+ symporter, nss familySAMN05216564_101520Not AvailableNegative496662 - 49805948109.3
neurotransmitter:na+ symporter, nss familySAMN05216564_101521Not AvailableNegative498176 - 49952547042.8
4-hydroxy-tetrahydrodipicolinate synthaseSAMN05216564_101522Not AvailablePositive499663 - 50055330809.4
phytoene desaturaseSAMN05216564_101523Not AvailablePositive500659 - 50215555605.4
4-hydroxybenzoate polyprenyltransferaseSAMN05216564_101524Not AvailablePositive502176 - 50324637175.4
putative membrane proteinSAMN05216564_101525Not AvailablePositive503236 - 50418933652.2
hypothetical proteinSAMN05216564_101526Not AvailablePositive504215 - 5044307516.46

Displaying genes 521 – 530 of 3406 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.