Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmoprotectant transport system permease protein | SAMN04515617_102254 | Not Available | Positive | 639766 - 640527 | 26614.4 |
| atp-dependent rna helicase csda | SAMN04515617_102255 | Not Available | Positive | 640829 - 642838 | 73623.3 |
| uncharacterized conserved protein | SAMN04515617_102256 | Not Available | Positive | 642979 - 643467 | 18357.0 |
| outer membrane protein (porin) | SAMN04515617_102257 | Not Available | Negative | 643563 - 644639 | 37551.1 |
| monosaccharide abc transporter substrate-binding protein, cut2 family (tc 3.a.1.2.-) | SAMN04515617_102258 | Not Available | Negative | 644875 - 645813 | 33203.1 |
| ribose transport system permease protein | SAMN04515617_102259 | Not Available | Negative | 645932 - 646984 | 36920.4 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN04515617_102260 | Not Available | Negative | 647019 - 648596 | 57637.9 |
| l-fucose dehydrogenase | SAMN04515617_102261 | Not Available | Negative | 648698 - 649474 | 27250.7 |
| l-fuconate dehydratase | SAMN04515617_102262 | Not Available | Negative | 649587 - 650864 | 47507.3 |
| 2,4-diketo-3-deoxy-l-fuconate hydrolase | SAMN04515617_102263 | Not Available | Negative | 650885 - 651739 | 30630.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
