Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04515617_102204 | Not Available | Negative | 587851 - 588024 | 7050.37 |
| spermidine synthase | SAMN04515617_102205 | Not Available | Positive | 588441 - 589286 | 31789.2 |
| ni,fe-hydrogenase iii small subunit | SAMN04515617_102206 | Not Available | Negative | 589297 - 589809 | 17974.9 |
| ni,fe-hydrogenase iii large subunit | SAMN04515617_102207 | Not Available | Negative | 589809 - 591368 | 57315.9 |
| hydrogenase-4 component f | SAMN04515617_102208 | Not Available | Negative | 591369 - 592826 | 52333.8 |
| hydrogenase-4 component e | SAMN04515617_102209 | Not Available | Negative | 592828 - 593487 | 24243.0 |
| formate hydrogenlyase subunit 4 | SAMN04515617_102210 | Not Available | Negative | 593489 - 594439 | 34062.0 |
| hypothetical protein | SAMN04515617_102211 | Not Available | Negative | 594436 - 596445 | 72807.4 |
| hypothetical protein | SAMN04515617_102212 | Not Available | Positive | 596672 - 596872 | 7464.04 |
| uncharacterized membrane protein yoak, upf0700 family | SAMN04515617_102213 | Not Available | Negative | 596929 - 597696 | 27847.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
