Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-aminocyclopropane-1-carboxylate deaminase | SAMN04515617_102124 | Not Available | Negative | 505465 - 506481 | 36631.0 |
| dna-binding transcriptional regulator, lrp family | SAMN04515617_102125 | Not Available | Positive | 506689 - 507204 | 18898.2 |
| dna-binding transcriptional regulator, lysr family | SAMN04515617_102126 | Not Available | Negative | 507259 - 508167 | 33527.9 |
| peptide/nickel transport system substrate-binding protein | SAMN04515617_102127 | Not Available | Positive | 508326 - 509861 | 56362.7 |
| peptide/nickel transport system permease protein | SAMN04515617_102128 | Not Available | Positive | 509947 - 510864 | 33355.7 |
| peptide/nickel transport system permease protein | SAMN04515617_102129 | Not Available | Positive | 510874 - 511821 | 33321.6 |
| peptide/nickel transport system atp-binding protein | SAMN04515617_102130 | Not Available | Positive | 511872 - 512861 | 36249.4 |
| peptide/nickel transport system atp-binding protein | SAMN04515617_102131 | Not Available | Positive | 512858 - 513733 | 31732.6 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN04515617_102132 | Not Available | Positive | 513823 - 515226 | 50238.4 |
| hippurate hydrolase | SAMN04515617_102133 | Not Available | Positive | 515298 - 516482 | 43011.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
