Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyl-coa transferase | SAMN04515617_1292 | Not Available | Positive | 4708416 - 4709666 | 45530.5 |
| hypothetical protein | SAMN04515617_1293 | Not Available | Positive | 4709802 - 4710050 | 9265.09 |
| d-amino-acid dehydrogenase | SAMN04515617_1294 | Not Available | Negative | 4710094 - 4711410 | 47781.2 |
| pyruvate kinase, alpha/beta domain | SAMN04515617_1295 | Not Available | Negative | 4711440 - 4711577 | 4762.74 |
| outer membrane protein (porin) | SAMN04515617_1296 | Not Available | Negative | 4711674 - 4713242 | 54905.6 |
| cyclic pyranopterin phosphate synthase | SAMN04515617_1297 | Not Available | Negative | 4713451 - 4714551 | 40806.5 |
| formate dehydrogenase delta subunit | SAMN04515617_1298 | Not Available | Negative | 4714553 - 4714777 | 8391.26 |
| formate dehydrogenase alpha subunit | SAMN04515617_1299 | Not Available | Negative | 4714798 - 4717671 | 104970.0 |
| formate dehydrogenase beta subunit | SAMN04515617_12910 | Not Available | Negative | 4717704 - 4719257 | 54854.1 |
| formate dehydrogenase gamma subunit | SAMN04515617_12911 | Not Available | Negative | 4719254 - 4719745 | 17653.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
