Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN04515617_1284 | Not Available | Positive | 4671125 - 4672384 | 45815.4 |
| udp-glucose 4-epimerase | SAMN04515617_1285 | Not Available | Positive | 4672381 - 4673376 | 36306.7 |
| atp-binding cassette, subfamily b, hlyb/cyab | SAMN04515617_1286 | Not Available | Positive | 4673429 - 4675681 | 82401.8 |
| hypothetical protein | SAMN04515617_1287 | Not Available | Positive | 4676001 - 4676504 | 19258.3 |
| ca2+-binding protein, rtx toxin-related | SAMN04515617_1288 | Not Available | Positive | 4676533 - 4685250 | 293426.0 |
| hlyd family secretion protein | SAMN04515617_1289 | Not Available | Positive | 4685290 - 4686663 | 50070.1 |
| outer membrane protein | SAMN04515617_12810 | Not Available | Positive | 4686660 - 4688024 | 48803.9 |
| hypothetical protein | SAMN04515617_12811 | Not Available | Positive | 4688154 - 4688414 | 9654.85 |
| transposase | SAMN04515617_12812 | Not Available | Positive | 4689075 - 4690436 | 50107.2 |
| transcriptional regulator epsa | SAMN04515617_12813 | Not Available | Positive | 4690799 - 4691602 | 30640.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
