Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alpha,beta-d-heptose 7-phosphate 1-kinase | SAMN04515617_12417 | Not Available | Negative | 4513455 - 4514396 | 33586.6 |
| udpglucose 6-dehydrogenase | SAMN04515617_12418 | Not Available | Negative | 4514401 - 4515795 | 50513.4 |
| lipopolysaccharide biosynthesis regulator ycim, contains six tpr domains and a predicted metal-binding c-terminal domain | SAMN04515617_12419 | Not Available | Negative | 4515850 - 4517025 | 44400.3 |
| uncharacterized integral membrane protein | SAMN04515617_12420 | Not Available | Negative | 4517126 - 4517440 | 11554.4 |
| integration host factor subunit beta | SAMN04515617_12421 | Not Available | Negative | 4517654 - 4517959 | 11359.8 |
| small subunit ribosomal protein s1 | SAMN04515617_12422 | Not Available | Negative | 4517989 - 4519704 | 62437.6 |
| cytidylate kinase | SAMN04515617_12423 | Not Available | Negative | 4519910 - 4520581 | 24022.7 |
| helicase conserved c-terminal domain-containing protein | SAMN04515617_12424 | Not Available | Negative | 4520673 - 4524176 | 129334.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN04515617_12425 | Not Available | Negative | 4524191 - 4525531 | 47960.6 |
| prephenate dehydrogenase | SAMN04515617_12426 | Not Available | Negative | 4525531 - 4526430 | 31395.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
