Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| basic amino acid/polyamine antiporter, apa family | SAMN04515617_1227 | Not Available | Positive | 4371319 - 4372782 | 51623.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN04515617_1228 | Not Available | Positive | 4372786 - 4373670 | 31240.7 |
| urocanate hydratase | SAMN04515617_1229 | Not Available | Positive | 4373765 - 4375465 | 61604.4 |
| histidine ammonia-lyase | SAMN04515617_12210 | Not Available | Positive | 4375537 - 4377078 | 54032.3 |
| hypothetical protein | SAMN04515617_12211 | Not Available | Positive | 4377108 - 4377722 | 22296.6 |
| imidazolonepropionase | SAMN04515617_12212 | Not Available | Positive | 4377703 - 4378950 | 44777.9 |
| formimidoylglutamate deiminase | SAMN04515617_12213 | Not Available | Positive | 4378964 - 4380343 | 50070.5 |
| n-formylglutamate deformylase | SAMN04515617_12214 | Not Available | Positive | 4380377 - 4381198 | 30782.6 |
| cardiolipin synthase | SAMN04515617_12215 | Not Available | Negative | 4381199 - 4382533 | 48898.6 |
| site-specific recombinase | SAMN04515617_12216 | Not Available | Negative | 4382585 - 4384696 | 77879.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
