Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter membrane protein 2, haat family (tc 3.a.1.4.-) | SAMN04515617_12127 | Not Available | Negative | 4320454 - 4321668 | 43176.9 |
| amino acid/amide abc transporter membrane protein 1, haat family (tc 3.a.1.4.-) | SAMN04515617_12128 | Not Available | Negative | 4321683 - 4322612 | 32470.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04515617_12129 | Not Available | Negative | 4323267 - 4324199 | 33752.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slpa | SAMN04515617_12130 | Not Available | Negative | 4324244 - 4324699 | 16579.8 |
| dna replication and repair protein radc | SAMN04515617_12131 | Not Available | Positive | 4324812 - 4325486 | 24474.6 |
| lsu ribosomal protein l28p | SAMN04515617_12132 | Not Available | Positive | 4325622 - 4325858 | 8786.76 |
| large subunit ribosomal protein l33 | SAMN04515617_12133 | Not Available | Positive | 4325881 - 4326048 | 6402.85 |
| nadph2:quinone reductase | SAMN04515617_12134 | Not Available | Negative | 4326150 - 4327142 | 33758.1 |
| dna-binding transcriptional regulator, lysr family | SAMN04515617_12135 | Not Available | Positive | 4327234 - 4328091 | 31163.4 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN04515617_12136 | Not Available | Negative | 4328224 - 4329417 | 45319.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
