Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative urate catabolism protein | SAMN04515617_12093 | Not Available | Positive | 4286033 - 4286992 | 36030.5 |
| nucleoside-specific outer membrane channel protein tsx | SAMN04515617_12094 | Not Available | Positive | 4287085 - 4287969 | 32723.8 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN04515617_12095 | Not Available | Positive | 4288077 - 4288838 | 27726.2 |
| 4-oxalocrotonate tautomerase | SAMN04515617_12096 | Not Available | Positive | 4288879 - 4289061 | 6877.22 |
| aromatic amino acid lyase | SAMN04515617_12097 | Not Available | Negative | 4289151 - 4289954 | 29161.8 |
| ketol-acid reductoisomerase | SAMN04515617_1211 | Not Available | Negative | 4290003 - 4291019 | 36584.7 |
| acetolactate synthase, small subunit | SAMN04515617_1212 | Not Available | Negative | 4291095 - 4291586 | 17975.9 |
| acetolactate synthase, large subunit | SAMN04515617_1213 | Not Available | Negative | 4291589 - 4293316 | 63303.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04515617_1214 | Not Available | Positive | 4294180 - 4294749 | 21579.4 |
| protein of unknown function | SAMN04515617_1215 | Not Available | Positive | 4294746 - 4295156 | 14859.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
