Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc carboxypeptidase | SAMN04515617_12012 | Not Available | Positive | 4200521 - 4202296 | 65467.5 |
| choline dehydrogenase | SAMN04515617_12013 | Not Available | Negative | 4202841 - 4204436 | 58722.1 |
| hypothetical protein | SAMN04515617_12014 | Not Available | Negative | 4204606 - 4204830 | 8568.59 |
| hypothetical protein | SAMN04515617_12015 | Not Available | Negative | 4204988 - 4205296 | 11604.9 |
| hypothetical protein | SAMN04515617_12016 | Not Available | Negative | 4205452 - 4206102 | 24035.6 |
| riboflavin synthase alpha chain | SAMN04515617_12017 | Not Available | Negative | 4206145 - 4206771 | 21943.5 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN04515617_12018 | Not Available | Negative | 4206788 - 4207873 | 38299.4 |
| type iv pilus assembly protein pilw | SAMN04515617_12019 | Not Available | Negative | 4207998 - 4208963 | 33573.1 |
| type iv fimbrial biogenesis protein fimt | SAMN04515617_12020 | Not Available | Negative | 4208957 - 4209499 | 19230.3 |
| transcriptional repressor nrdr | SAMN04515617_12021 | Not Available | Negative | 4209600 - 4210067 | 18109.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
