Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine ammonia-lyase light chain | SAMN04515617_11881 | Not Available | Positive | 4070038 - 4070847 | 29105.0 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04515617_11882 | Not Available | Negative | 4070917 - 4072323 | 51008.4 |
| d-amino-acid dehydrogenase | SAMN04515617_11883 | Not Available | Positive | 4072654 - 4073886 | 44611.5 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN04515617_11884 | Not Available | Positive | 4073999 - 4075141 | 40585.0 |
| hypothetical protein | SAMN04515617_11885 | Not Available | Positive | 4075141 - 4075653 | 19837.2 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04515617_11886 | Not Available | Positive | 4075689 - 4076069 | 13842.5 |
| negative transcriptional regulator, paib family | SAMN04515617_11887 | Not Available | Negative | 4076284 - 4076922 | 23731.3 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN04515617_11888 | Not Available | Positive | 4077070 - 4078587 | 54154.4 |
| lysr family transcriptional regulator, malonate utilization transcriptional regulator | SAMN04515617_11889 | Not Available | Negative | 4078690 - 4079619 | 34473.8 |
| hypothetical protein | SAMN04515617_11890 | Not Available | Negative | 4079813 - 4080079 | 9720.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
