Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylpropionate dioxygenase, large terminal subunit | SAMN04515617_11851 | Not Available | Negative | 4036055 - 4037233 | 44176.7 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN04515617_11852 | Not Available | Negative | 4037236 - 4038084 | 30247.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04515617_11853 | Not Available | Negative | 4038540 - 4039229 | 25380.9 |
| outer membrane protein (porin) | SAMN04515617_11854 | Not Available | Negative | 4039585 - 4040640 | 37137.1 |
| p-cumic alcohol dehydrogenase | SAMN04515617_11855 | Not Available | Positive | 4040939 - 4041691 | 25875.9 |
| hypothetical protein | SAMN04515617_11856 | Not Available | Positive | 4042222 - 4042428 | 7995.56 |
| polygalacturonase | SAMN04515617_11857 | Not Available | Negative | 4042684 - 4044537 | 62172.0 |
| hypothetical protein | SAMN04515617_11858 | Not Available | Positive | 4044629 - 4044829 | 7435.68 |
| alginate lyase | SAMN04515617_11859 | Not Available | Positive | 4045001 - 4047421 | 85008.4 |
| hypothetical protein | SAMN04515617_11860 | Not Available | Positive | 4047654 - 4048127 | 16991.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
