Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN04515617_11841 | Not Available | Negative | 4024329 - 4025237 | 32890.9 |
| aldehyde dehydrogenase (nad+) | SAMN04515617_11842 | Not Available | Positive | 4025350 - 4026768 | 49903.3 |
| d-galactonate transporter | SAMN04515617_11843 | Not Available | Negative | 4027387 - 4028721 | 47859.1 |
| hypothetical protein | SAMN04515617_11844 | Not Available | Negative | 4028882 - 4029067 | 6919.39 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN04515617_11845 | Not Available | Negative | 4029723 - 4030946 | 43264.3 |
| ferredoxin, 2fe-2s | SAMN04515617_11846 | Not Available | Negative | 4030943 - 4031266 | 11731.2 |
| ferredoxin | SAMN04515617_11847 | Not Available | Negative | 4031291 - 4031515 | 8519.34 |
| cytochrome p450 | SAMN04515617_11848 | Not Available | Negative | 4031540 - 4032781 | 47164.6 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN04515617_11849 | Not Available | Negative | 4032928 - 4034370 | 50567.1 |
| vanillate o-demethylase ferredoxin subunit | SAMN04515617_11850 | Not Available | Negative | 4034582 - 4035550 | 34917.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
