Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN04515617_11625 | Not Available | Positive | 3749600 - 3750619 | 36829.5 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04515617_11626 | Not Available | Positive | 3750616 - 3751194 | 20946.6 |
| trap transporter, dctm subunit | SAMN04515617_11627 | Not Available | Positive | 3751271 - 3752620 | 47931.1 |
| malonate decarboxylase alpha subunit | SAMN04515617_11628 | Not Available | Positive | 3752620 - 3754281 | 60744.2 |
| malonate decarboxylase delta subunit | SAMN04515617_11629 | Not Available | Positive | 3754319 - 3754633 | 11235.5 |
| malonate decarboxylase beta subunit | SAMN04515617_11630 | Not Available | Positive | 3754630 - 3755529 | 31672.2 |
| malonate decarboxylase gamma subunit | SAMN04515617_11631 | Not Available | Positive | 3755532 - 3756242 | 25246.5 |
| phosphoribosyl-dephospho-coa transferase | SAMN04515617_11632 | Not Available | Positive | 3756226 - 3756897 | 24403.4 |
| triphosphoribosyl-dephospho-coa synthase | SAMN04515617_11633 | Not Available | Positive | 3756894 - 3757817 | 33343.2 |
| amino acid/amide abc transporter substrate-binding protein, haat family (tc 3.a.1.4.-) | SAMN04515617_11634 | Not Available | Positive | 3757910 - 3759055 | 40682.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
