Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN04515617_115101 | Not Available | Negative | 3688227 - 3688985 | 27768.0 |
| mfs transporter, acs family, glucarate transporter | SAMN04515617_115102 | Not Available | Positive | 3689271 - 3690692 | 51392.8 |
| galactarate dehydratase | SAMN04515617_115103 | Not Available | Positive | 3690689 - 3692275 | 56212.6 |
| 6-phosphogluconolactonase | SAMN04515617_115104 | Not Available | Positive | 3692286 - 3693368 | 38860.0 |
| membrane bound fad containing d-sorbitol dehydrogenase | SAMN04515617_115105 | Not Available | Positive | 3693399 - 3693965 | 19667.7 |
| choline dehydrogenase | SAMN04515617_115106 | Not Available | Positive | 3693962 - 3695560 | 58192.0 |
| cytochrome c, mono-and diheme variants | SAMN04515617_115107 | Not Available | Positive | 3695587 - 3696975 | 48942.3 |
| protein of unknown function | SAMN04515617_115108 | Not Available | Negative | 3697064 - 3698107 | 37398.7 |
| two-component system, ompr family, sensor kinase | SAMN04515617_115109 | Not Available | Negative | 3698204 - 3699514 | 48666.1 |
| two-component system, ompr family, response regulator | SAMN04515617_115110 | Not Available | Negative | 3699504 - 3700181 | 24573.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
