Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf1697 family | SAMN04515617_11551 | Not Available | Negative | 3630387 - 3630956 | 20609.8 |
| isochorismate hydrolase | SAMN04515617_11552 | Not Available | Positive | 3631067 - 3631618 | 19964.6 |
| transposase | SAMN04515617_11553 | Not Available | Positive | 3631725 - 3632135 | 15881.0 |
| prop effector | SAMN04515617_11554 | Not Available | Negative | 3632201 - 3632650 | 16893.2 |
| transcriptional regulator | SAMN04515617_11555 | Not Available | Negative | 3632854 - 3633804 | 35166.5 |
| nipsnap protein | SAMN04515617_11556 | Not Available | Positive | 3633911 - 3634759 | 31409.8 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04515617_11557 | Not Available | Positive | 3634834 - 3635478 | 22729.5 |
| mfs transporter, nnp family, nitrate/nitrite transporter | SAMN04515617_11558 | Not Available | Positive | 3635791 - 3637116 | 46478.8 |
| assimilatory nitrite reductase (nad(p)h) large subunit precursor | SAMN04515617_11559 | Not Available | Positive | 3637128 - 3639704 | 93198.3 |
| nitrite reductase (nadh) small subunit | SAMN04515617_11560 | Not Available | Positive | 3639743 - 3640090 | 12386.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
