Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| entericidin a | SAMN04515617_11480 | Not Available | Negative | 3493990 - 3494112 | 4350.43 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN04515617_11481 | Not Available | Negative | 3494152 - 3495552 | 50048.2 |
| hypothetical protein | SAMN04515617_11482 | Not Available | Negative | 3495601 - 3495726 | 4831.98 |
| threonine/homoserine efflux transporter rhta | SAMN04515617_11483 | Not Available | Negative | 3495754 - 3496638 | 30849.8 |
| hypothetical protein | SAMN04515617_11484 | Not Available | Positive | 3497086 - 3497484 | 14358.2 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04515617_11485 | Not Available | Positive | 3497511 - 3499076 | 57785.4 |
| hypothetical protein | SAMN04515617_11486 | Not Available | Negative | 3499102 - 3499296 | 6990.57 |
| collagen, middle region | SAMN04515617_11487 | Not Available | Negative | 3499380 - 3500771 | 40581.2 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN04515617_11488 | Not Available | Positive | 3501337 - 3502089 | 26366.4 |
| protein of unknown function | SAMN04515617_11489 | Not Available | Negative | 3502186 - 3503415 | 41139.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
