Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | SAMN04515617_11390 | Not Available | Negative | 3323371 - 3324180 | 29358.2 |
| nte family protein | SAMN04515617_11391 | Not Available | Negative | 3324186 - 3325370 | 43529.5 |
| iron(iii) transport system substrate-binding protein | SAMN04515617_11392 | Not Available | Positive | 3325575 - 3326609 | 37046.6 |
| iron(iii) transport system atp-binding protein | SAMN04515617_11393 | Not Available | Negative | 3326796 - 3327872 | 38898.1 |
| iron(iii) transport system permease protein | SAMN04515617_11394 | Not Available | Positive | 3328051 - 3329679 | 59002.8 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN04515617_11395 | Not Available | Positive | 3329735 - 3331249 | 56384.2 |
| protein of unknown function | SAMN04515617_11396 | Not Available | Negative | 3331238 - 3331483 | 8812.59 |
| d-ribose pyranase | SAMN04515617_11397 | Not Available | Negative | 3331537 - 3331929 | 13802.0 |
| ribokinase | SAMN04515617_11398 | Not Available | Negative | 3331931 - 3332845 | 30680.9 |
| transcriptional regulator, laci family | SAMN04515617_11399 | Not Available | Negative | 3332886 - 3333878 | 34882.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
