Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | SAMN04515617_11329 | Not Available | Positive | 3262580 - 3263434 | 30651.8 |
| hypothetical protein | SAMN04515617_11330 | Not Available | Negative | 3263440 - 3265044 | 58286.6 |
| outer membrane protein (porin) | SAMN04515617_11331 | Not Available | Positive | 3265684 - 3266865 | 40627.7 |
| hypothetical protein | SAMN04515617_11332 | Not Available | Positive | 3267050 - 3267715 | 24367.0 |
| integrase/recombinase xerc | SAMN04515617_11333 | Not Available | Positive | 3267736 - 3268719 | 35436.1 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04515617_11334 | Not Available | Positive | 3268845 - 3269444 | 21337.2 |
| gtpase, g3e family | SAMN04515617_11335 | Not Available | Positive | 3269541 - 3270596 | 38991.5 |
| transcriptional regulator, trar/dksa family | SAMN04515617_11336 | Not Available | Positive | 3270680 - 3271621 | 33426.1 |
| hypothetical protein | SAMN04515617_11337 | Not Available | Positive | 3271819 - 3272382 | 19531.4 |
| hypothetical protein | SAMN04515617_11338 | Not Available | Positive | 3272866 - 3274254 | 50064.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
