Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, ybir family | SAMN04515617_112168 | Not Available | Negative | 3221216 - 3222445 | 45346.8 |
| heat shock protein htpx | SAMN04515617_112169 | Not Available | Positive | 3222525 - 3223409 | 31218.6 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN04515617_112170 | Not Available | Positive | 3223482 - 3224105 | 22932.8 |
| zn-dependent protease (includes spoivfb) | SAMN04515617_112171 | Not Available | Positive | 3224267 - 3224926 | 24423.9 |
| tryptophanyl-trna synthetase | SAMN04515617_112172 | Not Available | Positive | 3224964 - 3226166 | 45325.1 |
| methyltransferase domain-containing protein | SAMN04515617_112173 | Not Available | Positive | 3226236 - 3226829 | 20594.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04515617_112174 | Not Available | Positive | 3226970 - 3227848 | 30976.9 |
| beta-barrel assembly machine subunit bamc | SAMN04515617_112175 | Not Available | Positive | 3227907 - 3229082 | 42888.3 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN04515617_112176 | Not Available | Positive | 3229137 - 3229913 | 28224.6 |
| 50s ribosomal protein l16 3-hydroxylase | SAMN04515617_112177 | Not Available | Negative | 3230911 - 3232032 | 41807.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
