Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04515617_112138 | Not Available | Positive | 3187040 - 3187390 | 12783.3 |
| gtp pyrophosphokinase | SAMN04515617_112139 | Not Available | Positive | 3187401 - 3189665 | 84324.2 |
| Trna-val | Not Available | Not Available | Positive | 3189760 - 3189834 | Not Available |
| transcriptional regulator, propionate catabolism operon regulatory protein | SAMN04515617_112141 | Not Available | Negative | 3189932 - 3191581 | 59654.0 |
| methylisocitrate lyase | SAMN04515617_112142 | Not Available | Positive | 3191843 - 3192730 | 31906.4 |
| 2-methylcitrate synthase | SAMN04515617_112143 | Not Available | Positive | 3192787 - 3193956 | 42335.4 |
| aconitate hydratase | SAMN04515617_112144 | Not Available | Positive | 3194094 - 3196700 | 94416.2 |
| hypothetical protein | SAMN04515617_112145 | Not Available | Positive | 3196716 - 3197906 | 40832.1 |
| isocitrate lyase | SAMN04515617_112146 | Not Available | Positive | 3198643 - 3200223 | 58332.1 |
| uncharacterized conserved protein, duf1697 family | SAMN04515617_112147 | Not Available | Negative | 3200335 - 3200859 | 18439.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
