Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | SAMN04515617_11258 | Not Available | Negative | 3107861 - 3109567 | 62706.4 |
| hypothetical protein | SAMN04515617_11259 | Not Available | Negative | 3109659 - 3109787 | 4821.16 |
| protein of unknown function | SAMN04515617_11260 | Not Available | Negative | 3110129 - 3110266 | 4856.52 |
| hypothetical protein | SAMN04515617_11261 | Not Available | Negative | 3110623 - 3110949 | 11988.4 |
| fr47-like protein | SAMN04515617_11262 | Not Available | Negative | 3111079 - 3111540 | 17078.6 |
| d-galactonate transporter | SAMN04515617_11263 | Not Available | Negative | 3111603 - 3112919 | 47534.8 |
| lysr family transcriptional regulator, nitrogen assimilation regulatory protein | SAMN04515617_11264 | Not Available | Positive | 3113153 - 3114088 | 33614.1 |
| 4-carboxymuconolactone decarboxylase | SAMN04515617_11265 | Not Available | Negative | 3114429 - 3114818 | 14031.0 |
| dna-binding transcriptional regulator, merr family | SAMN04515617_11266 | Not Available | Negative | 3114836 - 3115231 | 14977.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04515617_11267 | Not Available | Positive | 3115432 - 3116100 | 24697.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
