Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix-type nucleoside diphosphatase, yffh/adpp family | SAMN04515617_11227 | Not Available | Negative | 3073359 - 3073937 | 21861.9 |
| transcriptional regulator, deor family | SAMN04515617_11228 | Not Available | Positive | 3074051 - 3074806 | 26705.8 |
| sugar lactone lactonase yvre | SAMN04515617_11229 | Not Available | Negative | 3074843 - 3076090 | 40939.8 |
| hypothetical protein | SAMN04515617_11230 | Not Available | Positive | 3076271 - 3076996 | 26491.9 |
| merr family transcriptional regulator, redox-sensitive transcriptional activator soxr | SAMN04515617_11231 | Not Available | Negative | 3077008 - 3077493 | 18120.6 |
| glyoxalase-like domain-containing protein | SAMN04515617_11232 | Not Available | Positive | 3077852 - 3078517 | 24066.1 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04515617_11233 | Not Available | Positive | 3078925 - 3080082 | 40418.6 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04515617_11234 | Not Available | Positive | 3080075 - 3083170 | 112193.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04515617_11235 | Not Available | Positive | 3083206 - 3084669 | 51018.5 |
| threonyl-trna synthetase | SAMN04515617_11236 | Not Available | Positive | 3084990 - 3086909 | 72373.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
