Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose transport system substrate-binding protein | SAMN04515617_111164 | Not Available | Negative | 3030100 - 3031116 | 36133.5 |
| xylose isomerase | SAMN04515617_111165 | Not Available | Negative | 3031212 - 3032528 | 48670.3 |
| laci family transcriptional regulator | SAMN04515617_111166 | Not Available | Positive | 3032799 - 3034013 | 45120.2 |
| aldose 1-epimerase | SAMN04515617_111167 | Not Available | Positive | 3034038 - 3035105 | 38545.8 |
| phospholipase c | SAMN04515617_111168 | Not Available | Negative | 3035279 - 3037462 | 80698.5 |
| ammonium transporter, amt family | SAMN04515617_111169 | Not Available | Positive | 3037938 - 3039176 | 44544.6 |
| calcineurin-like phosphoesterase | SAMN04515617_111170 | Not Available | Positive | 3039453 - 3040169 | 26809.7 |
| branched-chain amino acid transport protein | SAMN04515617_111171 | Not Available | Negative | 3040191 - 3040517 | 11758.2 |
| 4-azaleucine resistance probable transporter azlc | SAMN04515617_111172 | Not Available | Negative | 3040514 - 3041239 | 26005.3 |
| aspartate racemase | SAMN04515617_111173 | Not Available | Positive | 3041514 - 3042212 | 25374.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
