Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid transport system substrate-binding protein | SAMN04515617_11013 | Not Available | Positive | 2657904 - 2658740 | 30449.7 |
| polar amino acid transport system permease protein | SAMN04515617_11014 | Not Available | Positive | 2658755 - 2659423 | 24762.1 |
| polar amino acid transport system atp-binding protein | SAMN04515617_11015 | Not Available | Positive | 2659426 - 2660208 | 28073.5 |
| d-amino-acid dehydrogenase | SAMN04515617_11016 | Not Available | Positive | 2660261 - 2661547 | 45292.8 |
| hypothetical protein | SAMN04515617_11017 | Not Available | Positive | 2661591 - 2662346 | 26708.4 |
| putative atpase | SAMN04515617_11018 | Not Available | Negative | 2662362 - 2663669 | 47645.6 |
| ferredoxin | SAMN04515617_11019 | Not Available | Positive | 2663852 - 2664184 | 12529.0 |
| outer membrane lipoprotein carrier protein | SAMN04515617_11020 | Not Available | Negative | 2664218 - 2664913 | 25042.2 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN04515617_11021 | Not Available | Negative | 2664918 - 2667257 | 85128.0 |
| thioredoxin reductase (nadph) | SAMN04515617_11022 | Not Available | Positive | 2667601 - 2668557 | 33676.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
