Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 2646187 - 2646276 | Not Available |
| seryl-trna synthetase | SAMN04515617_1104 | Not Available | Negative | 2646424 - 2647725 | 47325.6 |
| dipeptide transport system substrate-binding protein | SAMN04515617_1105 | Not Available | Negative | 2647861 - 2649489 | 59899.1 |
| dipeptide transport system atp-binding protein | SAMN04515617_1106 | Not Available | Negative | 2649501 - 2650502 | 36637.8 |
| dipeptide transport system atp-binding protein | SAMN04515617_1107 | Not Available | Negative | 2650502 - 2651551 | 38254.8 |
| dipeptide transport system permease protein | SAMN04515617_1108 | Not Available | Negative | 2651565 - 2652497 | 32840.1 |
| dipeptide transport system permease protein | SAMN04515617_1109 | Not Available | Negative | 2652494 - 2653504 | 36689.1 |
| dipeptide transport system substrate-binding protein | SAMN04515617_11010 | Not Available | Negative | 2653640 - 2655244 | 59798.8 |
| xaa-pro aminopeptidase | SAMN04515617_11011 | Not Available | Negative | 2655355 - 2656743 | 50966.0 |
| transcriptional regulator, contains xre-family hth domain | SAMN04515617_11012 | Not Available | Negative | 2656923 - 2657546 | 22668.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
