Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04515617_109191 | Not Available | Negative | 2607990 - 2609135 | 42997.9 |
| protein of unknown function | SAMN04515617_109192 | Not Available | Negative | 2609173 - 2610312 | 43414.8 |
| hypothetical protein | SAMN04515617_109193 | Not Available | Negative | 2610365 - 2611036 | 23439.0 |
| cyay protein | SAMN04515617_109194 | Not Available | Negative | 2611233 - 2611559 | 11477.5 |
| diaminopimelate decarboxylase | SAMN04515617_109195 | Not Available | Positive | 2611867 - 2613153 | 46245.3 |
| putative meta-pathway of phenol degradation | SAMN04515617_109196 | Not Available | Positive | 2613173 - 2613940 | 27841.6 |
| sulfoxide reductase heme-binding subunit yedz | SAMN04515617_109197 | Not Available | Negative | 2613907 - 2614575 | 25810.4 |
| sulfoxide reductase catalytic subunit yedy | SAMN04515617_109198 | Not Available | Negative | 2614592 - 2615578 | 36867.5 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04515617_109199 | Not Available | Negative | 2615653 - 2616324 | 24285.5 |
| cytochrome c-type biogenesis protein ccsb | SAMN04515617_109200 | Not Available | Negative | 2616329 - 2617474 | 43095.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
