Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04515617_109181 | Not Available | Negative | 2595109 - 2595798 | 23860.0 |
| dgtpase | SAMN04515617_109182 | Not Available | Negative | 2595893 - 2597035 | 43248.4 |
| 3-dehydroquinate synthase /shikimate kinase | SAMN04515617_109183 | Not Available | Negative | 2597032 - 2598774 | 63352.8 |
| type iv pilus assembly protein pilq | SAMN04515617_109184 | Not Available | Negative | 2598838 - 2601018 | 77076.7 |
| type iv pilus assembly protein pilp | SAMN04515617_109185 | Not Available | Negative | 2601015 - 2601563 | 20250.6 |
| type iv pilus assembly protein pilo | SAMN04515617_109186 | Not Available | Negative | 2601560 - 2602219 | 24312.2 |
| type iv pilus assembly protein piln | SAMN04515617_109187 | Not Available | Negative | 2602216 - 2602890 | 24323.1 |
| type iv pilus assembly protein pilm | SAMN04515617_109188 | Not Available | Negative | 2602890 - 2603975 | 39060.1 |
| penicillin-binding protein 1a | SAMN04515617_109189 | Not Available | Positive | 2604399 - 2606771 | 86731.8 |
| protein of unknown function | SAMN04515617_109190 | Not Available | Negative | 2606857 - 2607993 | 43419.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
