Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa hydroxylase | SAMN04515617_109171 | Not Available | Positive | 2585103 - 2585882 | 28547.7 |
| uncharacterized iron-regulated membrane protein | SAMN04515617_109172 | Not Available | Negative | 2585868 - 2587031 | 42037.9 |
| monovalent cation:h+ antiporter-2, cpa2 family | SAMN04515617_109173 | Not Available | Negative | 2587115 - 2589139 | 72931.7 |
| arabinose-5-phosphate isomerase | SAMN04515617_109174 | Not Available | Positive | 2589274 - 2590305 | 36287.0 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN04515617_109175 | Not Available | Positive | 2590305 - 2590889 | 20296.3 |
| lipopolysaccharide export system protein lptc | SAMN04515617_109176 | Not Available | Positive | 2590886 - 2591479 | 22443.0 |
| lipopolysaccharide export system protein lpta | SAMN04515617_109177 | Not Available | Positive | 2591560 - 2592114 | 20140.8 |
| lipopolysaccharide export system atp-binding protein | SAMN04515617_109178 | Not Available | Positive | 2592111 - 2592857 | 27307.2 |
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN04515617_109179 | Not Available | Positive | 2592968 - 2594458 | 55246.0 |
| ssu ribosomal protein s30p | SAMN04515617_109180 | Not Available | Positive | 2594626 - 2594976 | 13457.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
