Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, acs family, d-galactonate transporter | SAMN04515617_109161 | Not Available | Positive | 2573032 - 2574333 | 46911.9 |
| maleate isomerase | SAMN04515617_109162 | Not Available | Positive | 2574402 - 2575130 | 26688.9 |
| dihydropyrimidinase | SAMN04515617_109163 | Not Available | Positive | 2575160 - 2576563 | 51021.8 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN04515617_109164 | Not Available | Positive | 2576633 - 2577499 | 31036.3 |
| single-strand dna-binding protein | SAMN04515617_109165 | Not Available | Negative | 2577617 - 2578114 | 18079.1 |
| predicted arabinose efflux permease, mfs family | SAMN04515617_109166 | Not Available | Negative | 2578249 - 2579448 | 41995.1 |
| dna-binding transcriptional regulator, frmr family | SAMN04515617_109167 | Not Available | Positive | 2579834 - 2580112 | 10391.4 |
| nickel/cobalt exporter | SAMN04515617_109168 | Not Available | Positive | 2580215 - 2581348 | 41720.1 |
| hypothetical protein | SAMN04515617_109169 | Not Available | Positive | 2581696 - 2582043 | 12279.9 |
| excinuclease abc subunit a | SAMN04515617_109170 | Not Available | Positive | 2582220 - 2585087 | 105688.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
