Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, fis family | SAMN04515617_10990 | Not Available | Positive | 2506669 - 2507391 | 26019.2 |
| hypothetical protein | SAMN04515617_10991 | Not Available | Positive | 2507421 - 2507801 | 13645.7 |
| rna polymerase, sigma 32 subunit, rpoh | SAMN04515617_10992 | Not Available | Positive | 2508059 - 2508958 | 33244.0 |
| protein sco1/2 | SAMN04515617_10993 | Not Available | Negative | 2509051 - 2509695 | 23104.8 |
| protoheme ix farnesyltransferase | SAMN04515617_10994 | Not Available | Negative | 2509704 - 2510588 | 32854.2 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN04515617_10995 | Not Available | Negative | 2510585 - 2511751 | 42076.6 |
| cytochrome oxidase cu insertion factor, sco1/senc/prrc family | SAMN04515617_10996 | Not Available | Negative | 2511756 - 2512412 | 24641.0 |
| cytochrome oxidase assembly protein shyy1 | SAMN04515617_10997 | Not Available | Negative | 2512366 - 2513124 | 28369.4 |
| protein of unknown function | SAMN04515617_10998 | Not Available | Positive | 2513164 - 2513364 | 7359.57 |
| cytochrome c oxidase subunit 3 | SAMN04515617_10999 | Not Available | Negative | 2513509 - 2514369 | 31745.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
