Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase beta chain | SAMN04515617_108113 | Not Available | Negative | 2283082 - 2284239 | 44528.2 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN04515617_108114 | Not Available | Negative | 2284462 - 2287386 | 107972.0 |
| ampd protein | SAMN04515617_108115 | Not Available | Negative | 2287816 - 2288457 | 23657.9 |
| two-component system, ntrc family, response regulator pilr | SAMN04515617_108116 | Not Available | Negative | 2288495 - 2289985 | 53583.5 |
| two-component system, ntrc family, sensor histidine kinase pils | SAMN04515617_108117 | Not Available | Negative | 2290010 - 2291752 | 63552.0 |
| uncharacterized protein | SAMN04515617_108118 | Not Available | Negative | 2291870 - 2292148 | 9595.54 |
| abc-type uncharacterized transport system, permease component | SAMN04515617_108119 | Not Available | Negative | 2292145 - 2292954 | 29856.5 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN04515617_108120 | Not Available | Positive | 2293239 - 2294606 | 48850.4 |
| swib/mdm2 domain-containing protein | SAMN04515617_108121 | Not Available | Positive | 2294953 - 2295321 | 13009.3 |
| transglycosylase slt domain-containing protein | SAMN04515617_108122 | Not Available | Negative | 2295535 - 2296182 | 24915.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
