Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase | SAMN04515617_107224 | Not Available | Positive | 2121894 - 2122379 | 17300.0 |
| peptidyl-dipeptidase dcp | SAMN04515617_107225 | Not Available | Negative | 2122457 - 2124658 | 80773.7 |
| outer membrane protein (porin) | SAMN04515617_107226 | Not Available | Negative | 2124874 - 2125947 | 37588.3 |
| iron(iii) transport system atp-binding protein | SAMN04515617_107227 | Not Available | Negative | 2126113 - 2127204 | 39760.1 |
| iron(iii) transport system permease protein | SAMN04515617_107228 | Not Available | Negative | 2127232 - 2129052 | 66311.0 |
| iron(iii) transport system substrate-binding protein | SAMN04515617_107229 | Not Available | Negative | 2129126 - 2130226 | 39490.2 |
| putative tricarboxylic transport membrane protein | SAMN04515617_107230 | Not Available | Negative | 2130384 - 2131355 | 34273.6 |
| two-component system, ompr family, response regulator tctd | SAMN04515617_107231 | Not Available | Positive | 2131553 - 2132242 | 25549.1 |
| two-component system, ompr family, sensor histidine kinase tcte | SAMN04515617_107232 | Not Available | Positive | 2132239 - 2133753 | 55467.0 |
| dna-binding transcriptional regulator, frmr family | SAMN04515617_107233 | Not Available | Positive | 2133822 - 2134157 | 11784.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
