Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system atp-binding protein | SAMN04515617_107204 | Not Available | Negative | 2090977 - 2091735 | 27186.0 |
| amino acid/amide abc transporter atp-binding protein 1, haat family (tc 3.a.1.4.-) | SAMN04515617_107205 | Not Available | Negative | 2091735 - 2092505 | 28141.3 |
| choline dehydrogenase | SAMN04515617_107206 | Not Available | Negative | 2092730 - 2094352 | 58812.5 |
| regulatory helix-turn-helix protein, lysr family | SAMN04515617_107207 | Not Available | Positive | 2094561 - 2094833 | 9796.71 |
| aspartate carbamoyltransferase | SAMN04515617_107208 | Not Available | Positive | 2096224 - 2097525 | 47920.5 |
| hypothetical protein | SAMN04515617_107209 | Not Available | Negative | 2097610 - 2099643 | 72077.3 |
| protein of unknown function | SAMN04515617_107210 | Not Available | Positive | 2099943 - 2101949 | 72670.8 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN04515617_107211 | Not Available | Negative | 2102088 - 2105822 | 133946.0 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN04515617_107212 | Not Available | Positive | 2106128 - 2106586 | 17226.2 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04515617_107213 | Not Available | Positive | 2107109 - 2108839 | 61707.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
