Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN04515617_107174 | Not Available | Negative | 2060294 - 2061748 | 51427.9 |
| putative spermidine/putrescine transport system permease protein | SAMN04515617_107175 | Not Available | Negative | 2061854 - 2062693 | 30159.7 |
| putative spermidine/putrescine transport system permease protein | SAMN04515617_107176 | Not Available | Negative | 2062698 - 2063990 | 46774.8 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN04515617_107177 | Not Available | Negative | 2064084 - 2065124 | 37480.9 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN04515617_107178 | Not Available | Negative | 2065259 - 2066407 | 41959.1 |
| 4-aminobutyrate aminotransferase | SAMN04515617_107179 | Not Available | Negative | 2066427 - 2067743 | 46269.2 |
| transcriptional regulator, gntr family | SAMN04515617_107180 | Not Available | Positive | 2067851 - 2069395 | 56830.7 |
| cyclohexadienyl dehydratase | SAMN04515617_107181 | Not Available | Positive | 2069433 - 2070218 | 28868.7 |
| lysophospholipase l1 | SAMN04515617_107182 | Not Available | Negative | 2070236 - 2071048 | 29371.1 |
| polyphosphate:nucleotide phosphotransferase, ppk2 family | SAMN04515617_107183 | Not Available | Negative | 2071144 - 2071950 | 30858.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
