Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized short protein ybdd, duf466 family | SAMN04515617_107134 | Not Available | Negative | 2024845 - 2025045 | 7625.18 |
| carbon starvation protein | SAMN04515617_107135 | Not Available | Negative | 2025056 - 2027128 | 74017.3 |
| two-component system, narl family, sensor kinase | SAMN04515617_107136 | Not Available | Positive | 2027371 - 2028735 | 49533.7 |
| two component transcriptional regulator, luxr family | SAMN04515617_107137 | Not Available | Positive | 2028835 - 2029461 | 23118.2 |
| protein of unknown function | SAMN04515617_107138 | Not Available | Negative | 2029486 - 2029965 | 18410.8 |
| atp-dependent dna helicase rep | SAMN04515617_107139 | Not Available | Positive | 2030361 - 2032424 | 77631.0 |
| protein of unknown function | SAMN04515617_107140 | Not Available | Positive | 2032466 - 2032762 | 10470.5 |
| recombination associated protein rdgc | SAMN04515617_107141 | Not Available | Positive | 2032991 - 2033890 | 33278.1 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04515617_107142 | Not Available | Negative | 2033927 - 2035057 | 41960.7 |
| hypothetical protein | SAMN04515617_107143 | Not Available | Positive | 2035346 - 2035864 | 19207.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
