Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid dehydrogenase | SAMN04515617_10784 | Not Available | Positive | 1971935 - 1973221 | 46506.1 |
| alanine racemase | SAMN04515617_10785 | Not Available | Positive | 1973272 - 1974378 | 39080.1 |
| acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase | SAMN04515617_10786 | Not Available | Positive | 1974415 - 1975653 | 44308.3 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN04515617_10787 | Not Available | Positive | 1975838 - 1977076 | 43585.8 |
| mj0570-related uncharacterized domain-containing protein | SAMN04515617_10788 | Not Available | Positive | 1977073 - 1977756 | 25252.8 |
| chloramphenicol-sensitive protein rard | SAMN04515617_10789 | Not Available | Positive | 1977900 - 1978802 | 33278.6 |
| sulfate-transporting atpase | SAMN04515617_10790 | Not Available | Positive | 1978903 - 1980570 | 61547.4 |
| protein of unknown function | SAMN04515617_10791 | Not Available | Negative | 1980638 - 1981216 | 21024.8 |
| l-asparaginase | SAMN04515617_10792 | Not Available | Negative | 1981526 - 1982641 | 39732.8 |
| small-conductance mechanosensitive channel | SAMN04515617_10793 | Not Available | Negative | 1982911 - 1983762 | 30784.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
