Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1 subcomplex epsilon subunit | SAMN04515617_10734 | Not Available | Positive | 1925640 - 1926056 | 14533.4 |
| uncharacterized conserved protein yrai | SAMN04515617_10735 | Not Available | Negative | 1926100 - 1926726 | 22673.5 |
| lipoic acid synthetase | SAMN04515617_10736 | Not Available | Negative | 1926958 - 1927977 | 37663.3 |
| lipoyl(octanoyl) transferase | SAMN04515617_10737 | Not Available | Negative | 1928016 - 1928594 | 20767.1 |
| protein of unknown function | SAMN04515617_10738 | Not Available | Negative | 1928812 - 1929120 | 10615.7 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN04515617_10739 | Not Available | Positive | 1929280 - 1930209 | 34479.5 |
| hypothetical protein | SAMN04515617_10740 | Not Available | Negative | 1930224 - 1930505 | 10342.4 |
| d-alanine transaminase | SAMN04515617_10741 | Not Available | Negative | 1930701 - 1931558 | 31338.0 |
| dna-3-methyladenine glycosylase i | SAMN04515617_10742 | Not Available | Positive | 1931617 - 1932312 | 26597.7 |
| ribosomal protein s12 methylthiotransferase accessory factor | SAMN04515617_10743 | Not Available | Positive | 1932490 - 1934220 | 64132.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
