Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport system atp-binding protein | SAMN04515617_106168 | Not Available | Positive | 1794438 - 1795700 | 46413.8 |
| alpha-1,2-rhamnosyltransferase | SAMN04515617_106169 | Not Available | Positive | 1795697 - 1797112 | 55186.2 |
| alpha-1,3-rhamnosyl/mannosyltransferase | SAMN04515617_106170 | Not Available | Positive | 1797087 - 1798226 | 42032.2 |
| rhamnosyl/mannosyltransferase | SAMN04515617_106171 | Not Available | Positive | 1798358 - 1799506 | 43000.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04515617_106172 | Not Available | Positive | 1799650 - 1801449 | 65746.8 |
| uncharacterized conserved protein, duf885 familyt | SAMN04515617_106173 | Not Available | Positive | 1801564 - 1803327 | 65775.4 |
| dna-binding transcriptional regulator, lysr family | SAMN04515617_106174 | Not Available | Negative | 1803369 - 1804268 | 33306.2 |
| predicted oxidoreductase | SAMN04515617_106175 | Not Available | Positive | 1804409 - 1805416 | 36204.6 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | SAMN04515617_106176 | Not Available | Negative | 1805430 - 1805885 | 16918.2 |
| cd2+/zn2+-exporting atpase | SAMN04515617_106177 | Not Available | Positive | 1806084 - 1808318 | 78895.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
