Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleobase:cation symporter-2, ncs2 family | SAMN04515617_105264 | Not Available | Negative | 1611674 - 1613068 | 48923.7 |
| dna-binding transcriptional regulator, lysr family | SAMN04515617_105265 | Not Available | Negative | 1613307 - 1614245 | 35695.6 |
| uncharacterized membrane protein | SAMN04515617_105266 | Not Available | Positive | 1614669 - 1615907 | 44942.3 |
| aromatic amino acid lyase | SAMN04515617_105267 | Not Available | Positive | 1616022 - 1616664 | 22865.5 |
| oxalyl-coa decarboxylase | SAMN04515617_1061 | Not Available | Positive | 1616750 - 1618480 | 60937.5 |
| formyl-coa transferase | SAMN04515617_1062 | Not Available | Positive | 1618514 - 1619764 | 45530.5 |
| pas domain s-box-containing protein | SAMN04515617_1063 | Not Available | Positive | 1619853 - 1620281 | 16047.2 |
| hypothetical protein | SAMN04515617_1064 | Not Available | Positive | 1620677 - 1621165 | 18089.5 |
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN04515617_1065 | Not Available | Negative | 1621433 - 1622365 | 33242.7 |
| hypothetical protein | SAMN04515617_1066 | Not Available | Negative | 1622403 - 1623236 | 28872.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
