Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyisobutyrate dehydrogenase | SAMN04515617_105233 | Not Available | Negative | 1580571 - 1581464 | 30404.0 |
| gntr family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex | SAMN04515617_105234 | Not Available | Negative | 1581478 - 1582230 | 26817.8 |
| branched-chain amino acid transport system substrate-binding protein | SAMN04515617_105235 | Not Available | Positive | 1582544 - 1583707 | 41908.6 |
| cbs domain-containing membrane protein | SAMN04515617_105236 | Not Available | Positive | 1583709 - 1584917 | 43805.6 |
| vitamin b12 transporter | SAMN04515617_105238 | Not Available | Positive | 1585298 - 1587187 | 67447.4 |
| iron complex transport system permease protein | SAMN04515617_105239 | Not Available | Positive | 1587228 - 1588214 | 33360.4 |
| iron complex transport system atp-binding protein | SAMN04515617_105240 | Not Available | Positive | 1588225 - 1589010 | 28320.4 |
| iron complex transport system substrate-binding protein | SAMN04515617_105241 | Not Available | Negative | 1589033 - 1589950 | 32580.1 |
| pantoate--beta-alanine ligase | SAMN04515617_105242 | Not Available | Negative | 1589965 - 1590804 | 31279.7 |
| condensin subunit scpa | SAMN04515617_105243 | Not Available | Negative | 1591005 - 1591868 | 32842.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
