Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | SAMN04515617_105103 | Not Available | Negative | 1440020 - 1440913 | 32203.8 |
| protein of unknown function | SAMN04515617_105104 | Not Available | Negative | 1440944 - 1441147 | 7694.88 |
| uncharacterized membrane protein yccc | SAMN04515617_105105 | Not Available | Negative | 1441150 - 1443258 | 76090.2 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04515617_105106 | Not Available | Negative | 1443271 - 1444776 | 53336.4 |
| protein of unknown function | SAMN04515617_105107 | Not Available | Negative | 1444956 - 1445228 | 9254.97 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN04515617_105108 | Not Available | Negative | 1445580 - 1446731 | 42141.8 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04515617_105109 | Not Available | Negative | 1446724 - 1447209 | 17872.3 |
| nad(p) transhydrogenase subunit alpha | SAMN04515617_105110 | Not Available | Positive | 1447523 - 1448638 | 38678.3 |
| l-aspartate 1-decarboxylase | SAMN04515617_105111 | Not Available | Positive | 1448759 - 1449121 | 13414.1 |
| nad(p) transhydrogenase subunit alpha | SAMN04515617_105112 | Not Available | Positive | 1449170 - 1449496 | 11373.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
