Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase i | SAMN04515617_104246 | Not Available | Negative | 1304835 - 1305638 | 29583.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN04515617_104247 | Not Available | Negative | 1305738 - 1307609 | 66975.9 |
| farnesyl diphosphate synthase | SAMN04515617_104248 | Not Available | Negative | 1307622 - 1308557 | 32821.7 |
| exodeoxyribonuclease vii small subunit | SAMN04515617_104249 | Not Available | Negative | 1308554 - 1308820 | 9377.11 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN04515617_104250 | Not Available | Positive | 1309055 - 1310158 | 42120.9 |
| s-adenosylmethionine uptake transporter | SAMN04515617_104251 | Not Available | Positive | 1310323 - 1311279 | 34932.7 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04515617_104252 | Not Available | Positive | 1311325 - 1312191 | 30669.1 |
| zinc and cadmium transporter | SAMN04515617_104253 | Not Available | Negative | 1312234 - 1312917 | 24972.8 |
| carboxymethylenebutenolidase | SAMN04515617_104254 | Not Available | Negative | 1313240 - 1314124 | 31524.6 |
| dna polymerase i | SAMN04515617_104255 | Not Available | Negative | 1314200 - 1316980 | 101929.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
