Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, acs family, hexuronate transporter | SAMN04515617_104236 | Not Available | Positive | 1292684 - 1293961 | 46571.1 |
| alpha-glucosidase | SAMN04515617_104237 | Not Available | Positive | 1293984 - 1296404 | 91455.0 |
| outer membrane protein (porin) | SAMN04515617_104238 | Not Available | Positive | 1296470 - 1297651 | 41044.9 |
| glycolate oxidase iron-sulfur subunit | SAMN04515617_104239 | Not Available | Negative | 1297724 - 1298962 | 45408.4 |
| glycolate oxidase fad binding subunit | SAMN04515617_104240 | Not Available | Negative | 1298985 - 1300064 | 37862.5 |
| glycolate oxidase | SAMN04515617_104241 | Not Available | Negative | 1300084 - 1301583 | 53287.2 |
| hypothetical protein | SAMN04515617_104242 | Not Available | Positive | 1301648 - 1301830 | 6824.46 |
| dna-binding transcriptional regulator, lysr family | SAMN04515617_104243 | Not Available | Negative | 1301752 - 1302657 | 33995.0 |
| d-lactate dehydrogenase (cytochrome) | SAMN04515617_104244 | Not Available | Negative | 1302691 - 1304100 | 50395.5 |
| cob(i)alamin adenosyltransferase | SAMN04515617_104245 | Not Available | Positive | 1304210 - 1304767 | 20303.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
