Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| queuine trna-ribosyltransferase | SAMN04515617_104216 | Not Available | Negative | 1270396 - 1271523 | 42041.9 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN04515617_104217 | Not Available | Negative | 1271555 - 1272574 | 37075.2 |
| atp-dependent dna helicase recg | SAMN04515617_104218 | Not Available | Positive | 1272781 - 1274904 | 77368.9 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN04515617_104219 | Not Available | Positive | 1275028 - 1275975 | 34313.1 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN04515617_104220 | Not Available | Positive | 1276079 - 1276954 | 31921.8 |
| membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, elab/yqjd/duf883 family | SAMN04515617_104221 | Not Available | Positive | 1277025 - 1277348 | 11458.6 |
| pyrroline-5-carboxylate reductase | SAMN04515617_104222 | Not Available | Negative | 1277448 - 1278272 | 28299.1 |
| hypothetical protein | SAMN04515617_104223 | Not Available | Negative | 1278262 - 1278990 | 26157.4 |
| pilus retraction atpase pilt | SAMN04515617_104224 | Not Available | Positive | 1279100 - 1280143 | 38025.8 |
| twitching motility protein pilu | SAMN04515617_104225 | Not Available | Positive | 1280176 - 1281312 | 42140.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
