Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase (quinone-dependent) iron-sulfur subunit | SAMN04515617_104156 | Not Available | Positive | 1205565 - 1206548 | 35116.7 |
| formate dehydrogenase subunit gamma | SAMN04515617_104157 | Not Available | Positive | 1206545 - 1207186 | 24394.5 |
| fdhe protein | SAMN04515617_104158 | Not Available | Positive | 1207197 - 1208132 | 34286.9 |
| l-seryl-trna(sec) selenium transferase | SAMN04515617_104159 | Not Available | Positive | 1208133 - 1209581 | 51530.6 |
| selenocysteine-specific translation elongation factor selb | SAMN04515617_104160 | Not Available | Positive | 1209578 - 1211518 | 70381.8 |
| heptosyltransferase-1 | SAMN04515617_104161 | Not Available | Negative | 1211661 - 1212647 | 36048.5 |
| phosphomannomutase / phosphoglucomutase | SAMN04515617_104162 | Not Available | Negative | 1212672 - 1214060 | 49911.9 |
| dna-binding protein h-ns | SAMN04515617_104163 | Not Available | Negative | 1214258 - 1214578 | 11790.0 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04515617_104164 | Not Available | Negative | 1214623 - 1216557 | 70720.1 |
| o-antigen biosynthesis protein wbqp | SAMN04515617_104165 | Not Available | Negative | 1216633 - 1217193 | 21229.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
