Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04515617_104135 | Not Available | Negative | 1181201 - 1181836 | 23916.8 |
| membrane fusion protein, multidrug efflux system | SAMN04515617_104136 | Not Available | Positive | 1182112 - 1183308 | 41296.4 |
| multidrug efflux pump | SAMN04515617_104137 | Not Available | Positive | 1183320 - 1186472 | 112082.0 |
| outer membrane protein, multidrug efflux system | SAMN04515617_104138 | Not Available | Positive | 1186465 - 1187904 | 51841.3 |
| udp-galactose 4-epimerase | SAMN04515617_104139 | Not Available | Positive | 1188050 - 1189072 | 37076.1 |
| o-antigen ligase | SAMN04515617_104140 | Not Available | Negative | 1189126 - 1190370 | 46369.1 |
| glycosyl transferase family 8 c-terminal domain-containing protein | SAMN04515617_104141 | Not Available | Negative | 1190487 - 1191101 | 23899.0 |
| hypothetical protein | SAMN04515617_104142 | Not Available | Positive | 1191333 - 1191461 | 4781.63 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN04515617_104143 | Not Available | Negative | 1191769 - 1192503 | 26157.2 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN04515617_104144 | Not Available | Negative | 1192514 - 1193851 | 48547.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
