Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein cpaf | SAMN04515617_104115 | Not Available | Negative | 1156104 - 1157459 | 49931.7 |
| pilus assembly protein cpae | SAMN04515617_104116 | Not Available | Negative | 1157577 - 1158881 | 46714.3 |
| pilus assembly protein cpac | SAMN04515617_104117 | Not Available | Negative | 1158902 - 1160218 | 45031.1 |
| pilus assembly protein cpab | SAMN04515617_104118 | Not Available | Negative | 1160275 - 1161291 | 34575.4 |
| tade-like protein | SAMN04515617_104119 | Not Available | Negative | 1161454 - 1161915 | 16316.0 |
| prepilin peptidase cpaa | SAMN04515617_104120 | Not Available | Negative | 1161995 - 1162537 | 19611.0 |
| pilus assembly protein flp/pila | SAMN04515617_104121 | Not Available | Negative | 1162628 - 1162825 | 6470.97 |
| hemolysin activation/secretion protein | SAMN04515617_104122 | Not Available | Negative | 1163300 - 1165018 | 61589.1 |
| collagen, middle region | SAMN04515617_104123 | Not Available | Negative | 1165180 - 1166478 | 39241.1 |
| 5'-nucleotidase | SAMN04515617_104124 | Not Available | Positive | 1166847 - 1167761 | 33824.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
